ESBiomech24 Congress in Edinburgh

PhD position in multiscale modeling of the intervertebral disc to predict the relationship between of degenerative processes and systemic low grade inflammation @Universitat Pompeu Fabra

The Biomechanics and Mechanobiology (BMMB) research group is currently looking for a PhD Candidate working on multicellular models to describe the dynamics of the long-term mechanobiological regulation of the intervertebral disc (IVD), and the effect of low-grade inflammation on such immune-privileged organ.

The IVD lies within the vertebras, providing flexibility to the spine and is, therefore, constantly subjected to complex loading conditions. It reflects the biggest avascular structure of the human body, where cell nutrition is diffusion dependent. Hence, cells within the IVD are constantly subjected to a demanding loading and nutrition environment.

Dynamics at the (multi-) cellular level, related to this harsh environment are currently thought to be a main driving force in the dynamics of IVD degeneration, given the highly load-bearing capacity of the IVD at the organ level. IVD degeneration accounts for over 40% of cases of low back pain, which affects over 80% of the world’s population at least once in an individual’s lifetime, which emphasizes the need for investigation.

IVD degeneration is a slow process, developing over months to years without being perceived by the person, therefore, classified as a “non-communicable disease”. Research suggests that the presence of proinflammatory cytokines plays a critical role in IVD degeneration, and being possibly a major regulator of non-communicable diseases in general, which includes systemic diseases such as osteoarthritis (OA) and atherosclerosis (AS).

The European Research Council Consolidator Grant (ERC CoG) funded project O-Health (101044828) aims at shedding light to the role of low-grade inflammation in non-communicable diseases. This PhD thesis will be part of the O-Health research project, focusing on the relationship between low-grade inflammation and IVD degenerative processes.

Job description:

The PhD Candidate will develop in silico models to approximate the regulation of IVD degeneration with emphasis on the role of low-grade inflammation within the intervertebral disc. The work encompasses various in silico modeling techniques to cover the multiple spatial scales, i.e. from a subcellular up to a multicellular level, required to adequately model regulations of inflammatory and degenerative processes. Those techniques include primarily network modeling and Agent-based modeling approaches. The IVD multiscale model developed by the PhD Candidate forms part of a large network of interconnected models that simulate other non-communicable diseases such as OA and AS and their connection via the blood stream. Hence, the PhD candidate will tightly collaborate with a team of computer scientists, data scientists, biomechanicians and experts in (cell-)biology.

The work contract covers funding for a period of up to four years. It will be led by the BMMB research lab, which forms part of the research unit BCN MedTech, at the Department of Communication and Information Technologies (DTIC) of the University Pompeu Fabra (UPF) in Barcelona, Spain.

More information:

https://euraxess.ec.europa.eu/jobs/131905

XLII Annual School 2023 – The Bioengineering of Sport – 11-14.09.2023 – Università di Padova

The impact of technology on sports is rapidly increasing, fostered by technological progress and digitalization. This school aims at offering students an overview of latest trends and operative tools to assess and enhance athlete performance, to prevent or to recover from injury, and to support coaching staff through bioengineeringapproaches.

The activities of the school will include lectures by recognized experts and hands-on computational projects on how to build an “athlete digital passport”. This integrates metrics for monitoring the musculoskeletal, cardiovascular, respiratory and metabolic system of the athlete, as well as in-field sport data analytics, to improve sport training, to perfect athletic movement and sport gestures, and to reduce the risk of injuries.

More information:

https://www.grupponazionalebioingegneria.it/gnbevent/xlii-annual-school-2023-the-bioengineering-of-sport/

IUTAM 2024 – Theoretical and numerical developments in cellular mechanobiology – 3-5 June 2024 – Seville, Spain

The international symposium supported by IUTAM on “Theoretical and numerical developments in cellular mechanobiology”, organized by the University of Seville (Spain), will be held during June 3 – 5 2024. In this symposium, different experts will review state-of-the-art theoretical and numerical methodologies in cellular mechanobiology. Different topics like numerical methods in mechanobiology, quantification of cellular forces or mechanics of living tissues and artificial substrates (although not restricted to) will be covered. The event will be an excellent opportunity for researchers to discuss open problems in this topic, to share different visions in this field, and to create synergies that propose solutions from our community to advance in biology and biomedicine.            

Looking forward to meet you in Seville.

On behalf of the Organizing Committee

José A. Sanz-Herrera. University of Seville, Seville, Spain.

Hans Van Oosterwyck. KU Leuven, Leuven, Belgium.

More information:

https://gestioneventos.us.es/congreso-iutam

Two open post-doctoral positions @Lund University

We have two open post-doctoral positions in our team – one experimental related to image analsyis of soft knee tissues, and one numerical related to computational modeling of tendon mechanics. 

1: Experimental synchrotron imaging of soft knee tissues:

We are looking for a post-doctoral researcher focusing on synchrotron imaging and image analysis to join our team.  The goal for the post-doc is to develop, perform and primarily analyze data from high resolution experimental imaging of soft tissues, acquired mainly using synchrotron phase contrast X-ray tomography, but also other imaging modalities. The goal includes characterizing meniscus and cartilage microstructure and its relation to loading, based on in situ loading experiments during imaging.

The link to the full advertisement and application system is below:

https://lu.varbi.com/en/what:job/jobID:631105/type:job/where:4/apply:1

Application deadline:  6th of July

Please contact Prof. Hanna Isaksson (hanna.isaksson@bme.lth.se) with any questions.

2: Numerical modeling of achilles tendon mechanics and/or mechanobiology:

We are looking for a post-doctoral researcher in computational modeling of tendons. This position is within a larger ERC-funded project (Tendon_MechBio) with the scope to elucidate how mechanical loading affects tendon mechanics and tendon regeneration. There is a possibility to employ up to two postdoctoral researchers with the following two aims. 

  1. To investigate how mechanical loading influences healing tendon function, structure and composition. The project includes further developing and validating an existing adaptive mechanoregulatory model for tendon repair. This will be based on collected experimental data. The developed computational scheme will be important for the project to elucidate the mechanobiological mechanisms at play. 
  2. To develop detailed structural and anatomical computational models of the tendon tissue, in order to understand how mechanical loading influences tendon function, structure and composition. The computational modeling will be based on unique collected experimental data. The detailed structural models will be key in the project to elucidate the mechanisms guiding the tendon organ and tissue level response to load. 

Applicants can present preferences between aim 1 or 2, or state interest in both options.

The link to the full advertisement and application system is below:

https://lu.varbi.com/en/what:job/jobID:630270/type:job/where:4/apply:1

Application deadline: 6th of July

Please contact Prof. Hanna Isaksson (hanna.isaksson@bme.lth.se) with any questions.

Summer school “Feel the force” – Exploring the role of mechanics in biology @KU Leuven

This summer school program is designed to provide young researchers with comprehensive training in various techniques for visualizing cellular forces. Participants will learn to utilize a range of methods such as traction force microscopy, FRET-based force sensors, biomimetic materials, microfluidics, and computational models. Spanning across 3.5 days, the summer school offers a diverse schedule including tutorial lectures, research talks, practical workshops, analysis tutorials, poster sessions, and brief oral presentations. Ample breaks are incorporated to encourage collaboration and networking among participants.

More information and registration details:

https://www.kuleuven.be/english/summer-schools/feeltheforce2023/Feel_the_Force_2023

PhD candidate on lattice structures applied to improve prosthetic sockets for amputees @University of Navarra

Description:

Amputee cases increase due to vascular diseases between elderly people, and mainly due to traffic accidents or war injuries in younger people. A prosthetic socket is the critical interface between a person’s body and their prosthetic device. Prosthetic sockets are traditionally made by rigid materials, which are not thermoregulatory and cause irritations, wounds and ulcerations. Hence, amputee comfort is still a challenging research field.

This position offers the possibility of researching in innovative lattice structures to design and optimise traditional sockets, and hence improve quality of life of the increasing young amputee population in the world.

Department:

Department of Mechanical Engineering and Materials of Tecnun, the Engineering School of the University of Navarra. During the PhD, the student will have the opportunity to do a placement at a foreign university or research center. The research project will be carried out in collaboration with the Clinica Universidad de Navarra.

Requirements:

– Master Degree in Mechanical Engineering or similar degrees.

– Language: Highly proficient in English.

– Software: Finite Element software (ABAQUS), basic programming in Matlab, Python, Computer Aided Design software (Rhinoceros, Grasshopper, CREO).

– To have initiative for research.

Offered:

Tecnun, the Engineering School of the University of Navarra offers a 4-year doctoral contract at the Technological Campus in San Sebastian (Spain).

Thesis should be completed in 4 years.

Start date: As soon as possible.

Documentation:

Send the following documentation by email to alopez@unav.es: cover letter describing your motivation as a thesis candidate; updated CV; undergraduate and Master’s degree transcripts.

Postdoc position on Computational modeling of drug-toxin interactions in the kidney @Maastricht University

The department of Cell Biology-Inspired Tissue Engineering (cBITE) at the MERLN Institute for Technologyinspired Regenerative Medicine at Maastricht University in the Netherlands invites applications for a postdoctoral position. The post-doctoral researcher will perform cutting-edge research in computational modeling methods applied to drug-toxin interactions in the kidney. Chronic kidney disease (CKD) is one of the top ten causes of death worldwide. Gradual decline in kidney function leads to accumulation of metabolic waste products (toxins) normally excreted by the kidneys, contributing to progression of CKD and its comorbidities, in particular cardiovascular disease. To alleviate the CKD complications, patients are routinely treated with many drugs, such as antihypertensive and cholesterol-lowering agents. However, the transporter proteins in kidney cells that handle these drugs are also responsible for secreting the toxins, and may, therefore, not be able to handle the competing demands. Considering the multitude of CKD drugs, toxins and transporter proteins and their potential interactions, investigating drug-toxin interactions is experimentally time consuming and difficult to accomplish. In this project, funded by the Dutch Kidney Foundation (https://nierstichting.nl/), we propose to integrate computational and experimental expertise with state-of-the-art technologies to address investigate drug-toxin interactions in the kidney and improve CKD drug treatments.

Project description: 

  • Computational modeling of drug-toxin transport in the proximal tubule; (competitive) binding kinetics;
  • Sensitivity analysis;
  • Analysis and integration of various in vitro/in vivo data for model calibration;
  • Parameter optimization.

Application deadline: 29 June 2023

More information:

https://www.academictransfer.com/en/328781/postdoc-position-merln-computational-modeling-of-drug-toxin-interactions-in-the-kidney/

PhD Scholarship: A computational platform for understanding bone structure optimisation @QUT/MSME

Institutes: Queensland University of Technology (QUT, Australia), and University of Paris Est Creteil (UPEC, France) — Multiscale modeling and simulation lab (MSME UMR 8208 CNRS).

Supervisors: Prof. Peter Pivonka (QUT, peter.pivonka@qut.edu.au) and Prof. Vittorio Sansalone (MSME UPEC, vittorio.sansalone@u-pec.fr)

Résumé: We seek to better understand how cortical bone is affected by osteoporosis and drug treatments. The successful PhD candidate will develop state-of-the-art computational models of bone remodeling to predict changes in cortical porosity and bone matrix properties due to osteoporosis and other treatment regimens. The in-silico results will be validated by experimental data provided by Prof David Cooper (USASK). Project areas include:

• Development of continuous, i.e. based on partial differential equations, models of bone remodeling to investigate the behaviour of basic multicellular units (BMUs) in cortical bone;

• Development of discrete, i.e. cellular automata based, models of BMU behaviour in cortical bone;

• Development of multiscale models of bone remodeling and adaptation that are able to predict changes in cortical porosity and bone tissue mineral density distribution.

Closing date: Applications will be accepted until the scholarship is awarded, but applications will be assessed starting June 25th, 2023.

More information (salary, essential and desirable criteria, etc.):

PhD position on hip biomechanics using statistical shape models @Lund University

The biomechanics group at Lund University, Sweden, is looking for a PhD student to investigate hip biomechanics using statistical shape models. This is a fully funded PhD position and applications must be sent through the official recruitment portal: https://lu.varbi.com/what:job/jobID:630169/?lang=en.

Deadline: June 23rd, 2023

More information:


Corporate members of the ESB:

AMTI force and motion logo
BERTEC logo
Beta CAE logo
BoB Biomechanics logo
Materialise logo
Nobel Biocare logo